Class RichardsonLucyDeconvolutionImageFilter
java.lang.Object
org.itk.simple.ProcessObject
org.itk.simple.ImageFilter
org.itk.simple.RichardsonLucyDeconvolutionImageFilter
Deconvolve an image using the Richardson-Lucy deconvolution algorithm.
This filter implements the Richardson-Lucy deconvolution algorithm as
defined in Bertero M and Boccacci P, "Introduction to Inverse
Problems in Imaging", 1998. The algorithm assumes that the input
image has been formed by a linear shift-invariant system with a known
kernel.
The Richardson-Lucy algorithm assumes that noise in the image follows
a Poisson distribution and that the distribution for each pixel is
independent of the other pixels.
This code was adapted from the Insight Journal contribution:
"Deconvolution: infrastructure and reference algorithms" by Gaetan
Lehmann https://doi.org/10.54294/tvgfv1
Gaetan Lehmann, Biologie du Developpement et de la Reproduction, INRA
de Jouy-en-Josas, France
Cory Quammen, The University of North Carolina at Chapel Hill
See:
 IterativeDeconvolutionImageFilter
 LandweberDeconvolutionImageFilter
 ProjectedLandweberDeconvolutionImageFilter
 itk::simple::RichardsonLucyDeconvolution for the procedural interface
 itk::RichardsonLucyDeconvolutionImageFilter for the Doxygen on the original ITK class.
C++ includes: sitkRichardsonLucyDeconvolutionImageFilter.h
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Nested Class SummaryNested ClassesModifier and TypeClassDescriptionstatic final classstatic final class
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Field SummaryFields inherited from class org.itk.simple.ProcessObjectswigCMemOwn
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Constructor SummaryConstructorsModifierConstructorDescriptionitk::simple::RichardsonLucyDeconvolutionImageFilter::RichardsonLucyDeconvolutionImageFilter() Default Constructor that takes no arguments and initializes default parametersprotectedRichardsonLucyDeconvolutionImageFilter(long cPtr, boolean cMemoryOwn) 
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Method SummaryModifier and TypeMethodDescriptionvoiddelete()virtual itk::simple::RichardsonLucyDeconvolutionImageFilter::~RichardsonLucyDeconvolutionImageFilter() DestructorImage itk::simple::RichardsonLucyDeconvolutionImageFilter::Execute(const Image &image1, const Image &image2) Execute the filter on the input imagesprotected voidfinalize()BoundaryConditionType itk::simple::RichardsonLucyDeconvolutionImageFilter::GetBoundaryCondition() constprotected static longgetName()std::string itk::simple::RichardsonLucyDeconvolutionImageFilter::GetName() const Name of this classbooleanbool itk::simple::RichardsonLucyDeconvolutionImageFilter::GetNormalize() constintint itk::simple::RichardsonLucyDeconvolutionImageFilter::GetNumberOfIterations() const Get the number of iterations.OutputRegionModeType itk::simple::RichardsonLucyDeconvolutionImageFilter::GetOutputRegionMode() constvoidSelf& itk::simple::RichardsonLucyDeconvolutionImageFilter::NormalizeOff()voidSelf& itk::simple::RichardsonLucyDeconvolutionImageFilter::NormalizeOn() Set the value of Normalize to true or false respectfully.voidsetBoundaryCondition(RichardsonLucyDeconvolutionImageFilter.BoundaryConditionType BoundaryCondition) Self& itk::simple::RichardsonLucyDeconvolutionImageFilter::SetBoundaryCondition(BoundaryConditionType BoundaryCondition)voidsetNormalize(boolean Normalize) Self& itk::simple::RichardsonLucyDeconvolutionImageFilter::SetNormalize(bool Normalize) Normalize the output image by the sum of the kernel componentsvoidsetNumberOfIterations(int NumberOfIterations) Self& itk::simple::RichardsonLucyDeconvolutionImageFilter::SetNumberOfIterations(int NumberOfIterations) Set the number of iterations.voidSelf& itk::simple::RichardsonLucyDeconvolutionImageFilter::SetOutputRegionMode(OutputRegionModeType OutputRegionMode)protected static longtoString()std::string itk::simple::RichardsonLucyDeconvolutionImageFilter::ToString() const Print ourselves outMethods inherited from class org.itk.simple.ImageFiltergetCPtr, swigReleaseMethods inherited from class org.itk.simple.ProcessObjectabort, addCommand, debugOff, debugOn, getCPtr, getDebug, getGlobalDefaultCoordinateTolerance, getGlobalDefaultDebug, getGlobalDefaultDirectionTolerance, getGlobalDefaultNumberOfThreads, getGlobalDefaultThreader, getGlobalWarningDisplay, getNumberOfThreads, getNumberOfWorkUnits, getProgress, globalDefaultDebugOff, globalDefaultDebugOn, globalWarningDisplayOff, globalWarningDisplayOn, hasCommand, removeAllCommands, setDebug, setGlobalDefaultCoordinateTolerance, setGlobalDefaultDebug, setGlobalDefaultDirectionTolerance, setGlobalDefaultNumberOfThreads, setGlobalDefaultThreader, setGlobalWarningDisplay, setNumberOfThreads, setNumberOfWorkUnits, swigRelease
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Constructor Details- 
RichardsonLucyDeconvolutionImageFilterprotected RichardsonLucyDeconvolutionImageFilter(long cPtr, boolean cMemoryOwn) 
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RichardsonLucyDeconvolutionImageFilterpublic RichardsonLucyDeconvolutionImageFilter()itk::simple::RichardsonLucyDeconvolutionImageFilter::RichardsonLucyDeconvolutionImageFilter() Default Constructor that takes no arguments and initializes default parameters
 
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Method Details- 
getCPtr
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swigRelease
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finalizeprotected void finalize()- Overrides:
- finalizein class- ImageFilter
 
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deletepublic void delete()virtual itk::simple::RichardsonLucyDeconvolutionImageFilter::~RichardsonLucyDeconvolutionImageFilter() Destructor- Overrides:
- deletein class- ImageFilter
 
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setNumberOfIterationspublic void setNumberOfIterations(int NumberOfIterations) Self& itk::simple::RichardsonLucyDeconvolutionImageFilter::SetNumberOfIterations(int NumberOfIterations) Set the number of iterations.
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getNumberOfIterationspublic int getNumberOfIterations()int itk::simple::RichardsonLucyDeconvolutionImageFilter::GetNumberOfIterations() const Get the number of iterations.
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setNormalizepublic void setNormalize(boolean Normalize) Self& itk::simple::RichardsonLucyDeconvolutionImageFilter::SetNormalize(bool Normalize) Normalize the output image by the sum of the kernel components
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normalizeOnpublic void normalizeOn()Self& itk::simple::RichardsonLucyDeconvolutionImageFilter::NormalizeOn() Set the value of Normalize to true or false respectfully.
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normalizeOffpublic void normalizeOff()Self& itk::simple::RichardsonLucyDeconvolutionImageFilter::NormalizeOff()
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getNormalizepublic boolean getNormalize()bool itk::simple::RichardsonLucyDeconvolutionImageFilter::GetNormalize() const
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setBoundaryConditionpublic void setBoundaryCondition(RichardsonLucyDeconvolutionImageFilter.BoundaryConditionType BoundaryCondition) Self& itk::simple::RichardsonLucyDeconvolutionImageFilter::SetBoundaryCondition(BoundaryConditionType BoundaryCondition)
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getBoundaryConditionBoundaryConditionType itk::simple::RichardsonLucyDeconvolutionImageFilter::GetBoundaryCondition() const
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setOutputRegionModepublic void setOutputRegionMode(RichardsonLucyDeconvolutionImageFilter.OutputRegionModeType OutputRegionMode) Self& itk::simple::RichardsonLucyDeconvolutionImageFilter::SetOutputRegionMode(OutputRegionModeType OutputRegionMode)
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getOutputRegionModeOutputRegionModeType itk::simple::RichardsonLucyDeconvolutionImageFilter::GetOutputRegionMode() const
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getNamestd::string itk::simple::RichardsonLucyDeconvolutionImageFilter::GetName() const Name of this class- Overrides:
- getNamein class- ProcessObject
 
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toStringstd::string itk::simple::RichardsonLucyDeconvolutionImageFilter::ToString() const Print ourselves out- Overrides:
- toStringin class- ProcessObject
 
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execute
 
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